PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0009s0600.6.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 264aa    MW: 29377.9 Da    PI: 6.2801
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0009s0600.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.2e-0990134751
                             HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                              +r + NReA r++R++Kka ++ Lee+v +L   N++L  ++++
  SapurV1A.0009s0600.6.p  90 RKRPAGNREAVRKYREKKKAHTAYLEEEVRKLRVLNQQLERKIQR 134
                             578899**********************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.1E-1283152No hitNo description
SMARTSM003381.2E-884151IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.08286152IPR004827Basic-leucine zipper domain
PfamPF077161.6E-1287133IPR004827Basic-leucine zipper domain
CDDcd146866.52E-1190142No hitNo description
SuperFamilySSF579594.74E-790134No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MKDYKMDDGE VEPSNHVLLP NPGSSGSLQC SGSVDSLLDE LLKNKRTCTH THTCNPPGPD  60
AIHTHTCYHT HTQVIASEED DNPDNREHSR KRPAGNREAV RKYREKKKAH TAYLEEEVRK  120
LRVLNQQLER KIQREAILEA EVLRLRSILV DLRGKIDTEL GVFPFQNQCN TTTVLKEGDC  180
GVQSTSGLMK LQCLADLPCF HTQIVGSSLQ VNNGRNENFM ESWEGNCQPT VVDCQANTNN  240
MANAGGHSMD MVETFMSSAS QAQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0009s0600.6.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1466300.0EF146630.1 Populus trichocarpa clone WS01210_O17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024452085.11e-129basic leucine zipper 23 isoform X1
RefseqXP_024452086.11e-129basic leucine zipper 23 isoform X1
TrEMBLA9PE841e-128A9PE84_POPTR; Uncharacterized protein
STRINGPOPTR_0003s20320.11e-129(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.19e-57bZIP family protein