PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0009s0600.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 264aa MW: 29377.9 Da PI: 6.2801 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.4 | 7.2e-09 | 90 | 134 | 7 | 51 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r + NReA r++R++Kka ++ Lee+v +L N++L ++++ SapurV1A.0009s0600.2.p 90 RKRPAGNREAVRKYREKKKAHTAYLEEEVRKLRVLNQQLERKIQR 134 578899**********************************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-12 | 83 | 152 | No hit | No description |
SMART | SM00338 | 1.2E-8 | 84 | 151 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.082 | 86 | 152 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.6E-12 | 87 | 133 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 6.52E-11 | 90 | 142 | No hit | No description |
SuperFamily | SSF57959 | 4.74E-7 | 90 | 134 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MKDYKMDDGE VEPSNHVLLP NPGSSGSLQC SGSVDSLLDE LLKNKRTCTH THTCNPPGPD 60 AIHTHTCYHT HTQVIASEED DNPDNREHSR KRPAGNREAV RKYREKKKAH TAYLEEEVRK 120 LRVLNQQLER KIQREAILEA EVLRLRSILV DLRGKIDTEL GVFPFQNQCN TTTVLKEGDC 180 GVQSTSGLMK LQCLADLPCF HTQIVGSSLQ VNNGRNENFM ESWEGNCQPT VVDCQANTNN 240 MANAGGHSMD MVETFMSSAS QAQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0009s0600.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF146630 | 0.0 | EF146630.1 Populus trichocarpa clone WS01210_O17 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024452085.1 | 1e-129 | basic leucine zipper 23 isoform X1 | ||||
Refseq | XP_024452086.1 | 1e-129 | basic leucine zipper 23 isoform X1 | ||||
TrEMBL | A9PE84 | 1e-128 | A9PE84_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0003s20320.1 | 1e-129 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 9e-57 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0009s0600.2.p |