PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0006s1330.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 517aa    MW: 55140.5 Da    PI: 6.5626
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0006s1330.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.44.3e-15292347358
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                             e+krerr+ +NRe+ArrsR+RK+a++ eLe+ v +L  e+++L       +++++ 
  SapurV1A.0006s1330.1.p 292 EVKRERRMKSNRESARRSRRRKQAQLNELETQVGQLRDERTSLLTHFTDVNQKCDD 347
                             79*****************************************9998888888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-15290354IPR004827Basic-leucine zipper domain
PfamPF001705.0E-12291346IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.875292344IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-9293343No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-10294356No hitNo description
PROSITE patternPS000360297312IPR004827Basic-leucine zipper domain
PfamPF124983.4E-31361489IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MNSVFSADDF SDPFWQSPPP PAPPPATAPA MNRSESEWAL EILLQEVSGV SVSSSSASET  60
HTAAPSVLSQ SSTSSIPPKN GEDEVVEITK HPIHHHHHHH HPNPNPHPQP LNRNLMAPTD  120
SEEYRAFLKS KLDLACAAAV AMSRETNAVK PEVFSSLSED QRLSARDMSL GTQAFHNGAG  180
QGISMAQIGA DGASLGIPSL PTAQGKSDGG SGIPALPAMQ RKSDGGSLGI PALPTTQRKS  240
DGGSPGIPAL PTTLRKQEVQ ARQTTSGSSR EDSDDDDLEG DTGTNENMDP AEVKRERRMK  300
SNRESARRSR RRKQAQLNEL ETQVGQLRDE RTSLLTHFTD VNQKCDDAAV DNRILKADIE  360
TLRAKITMAE EQVKRMTGLN PVLLARSSMP TPGMPFVGGQ VDASTNVAVP MQTNPHQFFH  420
QPVLGVAPAP PHLQRLNNFP NSTLVPLATN PQTDNGNSND GGITVMPSMP LTADGQSLPA  480
MPSMQKQIGS NARPAGTLPT CDSGLQHVVA KDAKKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306313RRSRRRKQ
2308313SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0006s1330.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1470420.0EF147042.1 Populus trichocarpa clone WS01226_K01 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002300809.30.0light-inducible protein CPRF2
TrEMBLA0A2K2BDD90.0A0A2K2BDD9_POPTR; BZIP family protein
STRINGPOPTR_0005s23900.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-29basic leucine zipper 25