PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Spipo14G0014500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family | Dof | ||||||||
Protein Properties | Length: 151aa MW: 15606.8 Da PI: 11.4239 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 40.9 | 4.4e-13 | 2 | 37 | 27 | 62 |
zf-Dof 27 sqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + Pr +Ck+ r+Wt+GG+lr +P+G g rkn+k+s Spipo14G0014500 2 ASPRLLCKSRGRHWTRGGSLRSIPIGLGFRKNNKRS 37 67******************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-6 | 1 | 35 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.3E-8 | 3 | 35 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MASPRLLCKS RGRHWTRGGS LRSIPIGLGF RKNNKRSAGA PSSMAKQSSN QPGLDARCPP 60 PPDQGAVSLC ASTSGIDDVM LNLLGSFTDL LSLHGHLRNI LGTFPGLALA FAGPSWWSNV 120 ASIFPGIFFG HGMGTRAASG TSSPSTCGIQ * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 2e-11 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Spipo14G0014500 |