PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo12G0037300
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family G2-like
Protein Properties Length: 156aa    MW: 17438.9 Da    PI: 9.9942
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo12G0037300genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like48.42.1e-159372755
          G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                     AtPk il+lm+ +gLt+ hvkSHLQkYR 
  Spipo12G0037300  9 ATPKGILKLMESEGLTICHVKSHLQKYRA 37
                     9***************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.5E-13838IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-11837IPR006447Myb domain, plants
SuperFamilySSF466894.3E-6937IPR009057Homeodomain-like
PfamPF143796.7E-1977123IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MASSVNAGAT PKGILKLMES EGLTICHVKS HLQKYRAAKN IPDPQECASS SLRVAGGSKG  60
EGGSFGRLDR LDPKNRMHMA EALRLQLEVQ RRLHEQLEIQ RTIQKKFEEQ GRQLQKMFEQ  120
QERAARSLFE KQGPEVQAHD EGRGPEITHF PPKIS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}.
UniProtTranscription factor involved in phosphate starvation signaling (PubMed:18263782, PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:18263782, ECO:0000269|PubMed:26082401}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not regulated by Pi starvation. {ECO:0000269|PubMed:18263782, ECO:0000269|PubMed:26082401}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265860.13e-39PREDICTED: myb family transcription factor PHL5-like
SwissprotB8ANX93e-32PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1
SwissprotQ10LZ13e-32PHR1_ORYSJ; Protein PHOSPHATE STARVATION RESPONSE 1
TrEMBLA0A1U8ASR37e-38A0A1U8ASR3_NELNU; myb family transcription factor PHL5-like
STRINGXP_010265860.11e-38(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69333751
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.18e-33G2-like family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]