PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen11g011090.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 347aa    MW: 39523.6 Da    PI: 9.4586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen11g011090.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.84.8e-082072421550
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                        +A rsR RK++ i+eLe+ v++L+ae ++L  ele
  Sopen11g011090.1 207 QSAHRSRVRKLQHIAELERTVQALQAEGSELSAELE 242
                       69******************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147031.17E-13198249No hitNo description
SMARTSM003382.2E-5198257IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-5207251No hitNo description
SuperFamilySSF579591.25E-6207251No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MESLNGSSSL KNFSFSNKQS IMDSTSPFLQ SYVDSNMDGS KGKAKPTEGS SHHHRWNSES  60
ILIEEQPSWL DDLLNEPPET TTVVHKGHRR SASDTFAYVG AAAERLNTWE EPKNKNVNVG  120
ASWGSVNYVS YKDLSAVPYE PKPNSSHEQK FNKAAQELNG APSVSHEKHN LREINNSKNQ  180
EGSNERSNNA QAKHSMSKAD AKRAKQQSAH RSRVRKLQHI AELERTVQAL QAEGSELSAE  240
LEFVDQQNII LSMENRALRQ RLDSLSQEQL IKHLEQEMLE RELTRLQTMY QMQRQQMQQQ  300
HQQPQQQNHS KHRRNKSRDL EAQFANLSIK NNEANSSRAQ VTGSVRM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754500.0HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015057894.10.0uncharacterized protein At4g06598-like
RefseqXP_027768639.10.0uncharacterized protein At4g06598-like
RefseqXP_027768640.10.0uncharacterized protein At4g06598-like
TrEMBLA0A3Q7JKV20.0A0A3Q7JKV2_SOLLC; Uncharacterized protein
STRINGSolyc11g020950.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114452023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-56bZIP family protein