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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen09g028180.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
GRAS |
Protein Properties |
Length: 503aa MW: 56356.6 Da PI: 6.2258 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen09g028180.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 348.1 | 1.4e-106 | 143 | 498 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++lLle A avs ++l +a+++L +l ++asp+g + +R++ayf++A+a+r+ +s+ ++++ l +t + +al++f+++sP++k
Sopen09g028180.1 143 LITLLLEGAVAVSVDNLGEAHRVLLELTQMASPYGpSCAERVVAYFAKAMASRVISSWLGICSPLINYKT-------VHTALQAFNNISPFIK 228
5789*******************************9999***********************87755444.......4568899********* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
f+h+t NqaIlea+++ +rvHiiD di+qGlQWpaL++ La+R egpp++ +Tg+g s e l etg++L++fA++lg++fef++ ++ +
Sopen09g028180.1 229 FAHFTSNQAILEAFHRRDRVHIIDVDIMQGLQWPALFHILATRMEGPPHVTMTGIGT----SMELLIETGKQLSNFAKRLGMSFEFHP-IVGK 316
*********************************************************....***************************.6899 PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
+++++++++++gEa+a+++v h+l+d +++ + +++l+++lsP+vv++veqe+ + ++sFl+rf+ +l+yys++fdsl a l ++
Sopen09g028180.1 317 AGEIDISTFKISRGEAIAIHWVQ--HSLYDATGPDWK----TMRLLQQLSPRVVTLVEQEIAL-GGSFLDRFVGSLHYYSTIFDSLGAFLESD 402
99********************9..99*999999888....**********************.789************************** PP
GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
++ r++vE+ ll rei n++a g +r+ + ++++Wr+ l++ GF +vp+s++ ++qa+l+l++++ +gy++ + +g+l lgWkd +L+++
Sopen09g028180.1 403 DSSRHSVEHGLLYREINNILAIGGPARNGE-DKFRHWRSELSKNGFIQVPMSTNSMAQAQLILNMFPpAHGYSLVQGDGTLRLGWKDTSLFTA 494
**************************7665.55************************************************************ PP
GRAS 371 SaWr 374
SaW+
Sopen09g028180.1 495 SAWT 498
***6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 503 aa
Download sequence Send
to blast |
MMKGESELIH QHTPLDQPNE QWDYCSPNHP SKTLITENRA NNPDQRNELS QWVEQVTRQL 60 LIEDLPENEF SDTDTTTYHV SALLGELRPN KIARRDSNSE GIGGHQQQQQ HEWNSTTHDD 120 HHIARDEMGV KGMSGLDDQG LNLITLLLEG AVAVSVDNLG EAHRVLLELT QMASPYGPSC 180 AERVVAYFAK AMASRVISSW LGICSPLINY KTVHTALQAF NNISPFIKFA HFTSNQAILE 240 AFHRRDRVHI IDVDIMQGLQ WPALFHILAT RMEGPPHVTM TGIGTSMELL IETGKQLSNF 300 AKRLGMSFEF HPIVGKAGEI DISTFKISRG EAIAIHWVQH SLYDATGPDW KTMRLLQQLS 360 PRVVTLVEQE IALGGSFLDR FVGSLHYYST IFDSLGAFLE SDDSSRHSVE HGLLYREINN 420 ILAIGGPARN GEDKFRHWRS ELSKNGFIQV PMSTNSMAQA QLILNMFPPA HGYSLVQGDG 480 TLRLGWKDTS LFTASAWTSP NSR
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor involved in asymmetric cell division. {ECO:0000250}. |