PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen07g030540.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family BES1
Protein Properties Length: 315aa    MW: 33828 Da    PI: 8.8962
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen07g030540.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222106.2e-6521451150
            DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 
                       ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+ +  g s+s sp+ss
  Sopen07g030540.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYQLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPMERLDFLGGSTSLSPCSS 94 
                       5899***************************************************************************************** PP

            DUF822  94 lqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                       +q        +sp +s ++sp+sssfpsp+s++ + + +   +sl+p+l++ls+ sss+
  Sopen07g030540.1  95 YQ--------PSPFTSNNPSPASSSFPSPASSSYAANLNMdgKSLIPWLKNLSSGSSSA 145
                       **........9****************9988766554433459*********9966654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-643139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY QLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPMERL DFLGGSTSLS PCSSYQPSPF TSNNPSPASS SFPSPASSSY  120
AANLNMDGKS LIPWLKNLSS GSSSASSSKL PNFHIHTGSI SAPVTPPFSS PTARTPRIKT  180
DAGWAGFRYP YLPSSTPASP GRQNFINAEC FAGISGPPSP TYSLVSPNPF GFKMDGLSRG  240
GSRMCTPGQS GACSPAIAAG LDHNADVPMA EVMISDEFAF GSNVAGMVKP WEGERIHEDC  300
VPDDLELTLG SSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754460.0HG975446.1 Solanum pennellii chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004244287.10.0BES1/BZR1 homolog protein 4
RefseqXP_015080953.10.0BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-121BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A3Q7HH430.0A0A3Q7HH43_SOLLC; Uncharacterized protein
STRINGSolyc07g062260.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-108BES1/BZR1 homolog 4