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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen05g030590.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 318aa MW: 35817.1 Da PI: 8.9416 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen05g030590.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 163 | 213 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+ +r++lg+f+ta +Aa a+++a+ +l+g
Sopen05g030590.1 163 RYRGVRQRP-WGKFAAEIRDPTRK--GTRVWLGTFDTAMDAAVAYDRAAFRLRG 213
8********.**********8542..4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MDSSSLAMIR QHLLDDVVFM ENSSSSSSSL EKSSSTLYSQ TSSNSESLES LTSEIKLESN 60 FSFYPDFINT PQSSNLESVS RFSDNSTIEF QAKPQKKRSF NDRKPSLNIS IPSVKKTEEP 120 KTGEVKTGEP KTEEPKTGEV KTGEVKTEYS VKEKMVENSE KKRYRGVRQR PWGKFAAEIR 180 DPTRKGTRVW LGTFDTAMDA AVAYDRAAFR LRGSKAILNF PLEVSNFKQE NHEIEKNVVK 240 FNSNTNYCGK RVRGEMENDE GIVMKKEVKR EQMVATPLTP SNWSSIWDCG NGKGIFEVPP 300 LSPLSPHSNF GYSQLLVS
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and in leaves. Also strongly induced by cycloheximide, mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |