PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen03g001990.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family BES1
Protein Properties Length: 323aa    MW: 34722.7 Da    PI: 8.1251
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen03g001990.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.73.1e-6421451148
            DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 
                       ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGtty+kg+kp  + +++g sas+sp+ss
  Sopen03g001990.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYKKGCKPVGHVDIIGYSASVSPCSS 94 
                       5899***************************************************************************************** PP

            DUF822  94 lqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                       +q        +sp +sy++sp+sssfpsp+s++ + + ++    ++l+p+l++ls+ ss
  Sopen03g001990.1  95 YQ--------PSPGASYNPSPASSSFPSPVSSNYVANVQNnhdpNTLIPWLKNLSSGSS 145
                       **........9******************999987665555888*********998443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.1E-653141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WIVEEDGTTY KKGCKPVGHV DIIGYSASVS PCSSYQPSPG ASYNPSPASS SFPSPVSSNY  120
VANVQNNHDP NTLIPWLKNL SSGSSPSSSR FPYHLYIPGS SISAPVTPPL SSPTARTPRM  180
SDDPMANSGW AQQHYAFLPS STPASPGRQT PPDSGWLSGV QTPQDGPSSP TFSLVSPNPF  240
GFKEPISNGG SRMWTPGQSG ACSPAIASGI DQTADVPMSD AISAEFAFGS HMMGLVKPWE  300
GERIHEECAT DDLELTLGNS STR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754420.0HG975442.1 Solanum pennellii chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015067386.10.0BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_015067387.10.0BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-130BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A3Q7FF780.0A0A3Q7FF78_SOLLC; Uncharacterized protein
TrEMBLM1CNX30.0M1CNX3_SOLTU; Uncharacterized protein
STRINGSolyc03g005990.2.10.0(Solanum lycopersicum)
STRINGPGSC0003DMT4000715110.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-116BES1/BZR1 homolog 4