PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen02g020970.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family BES1
Protein Properties Length: 325aa    MW: 35036.1 Da    PI: 8.2079
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen02g020970.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222039.2e-6321431147
            DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 
                       ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp  +   +g s s+sp+ss
  Sopen02g020970.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYRKGCKPV-TRIDIGGSVSVSPCSS 93 
                       5899************************************************************************.667788899******* PP

            DUF822  94 lqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvs 147
                       +q+s+ +s+ +spv+s+ +sp ss++ ++++        +    +sl+p+l++ls+ s
  Sopen02g020970.1  94 YQLSPGASYNPSPVSSSIPSPVSSHYVANVQ--------NnsdpNSLIPWLKNLSSGS 143
                       **55555555555555555555555555444........2344489*******98754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.9E-643140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WIVEEDGTTY RKGCKPVTRI DIGGSVSVSP CSSYQLSPGA SYNPSPVSSS IPSPVSSHYV  120
ANVQNNSDPN SLIPWLKNLS SGSSPSLSKF PHHLCIPGGS ISAPVTPPLS SPTASTPRMN  180
DNWENPTANS TWIQQHYPFL PSSTPPSPGR QTPPDSGWLS GVQTPQDGPS SPTFSLVSSN  240
PFGFKEPLSN GGSRMWTPGQ SGTCSPAVGP CMDQTADVPM SDAISAEFAF GSNMKGVVKP  300
WEGERIHEEC ISDDLELTLG NSSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015063535.10.0BES1/BZR1 homolog protein 4 isoform X3
RefseqXP_015063536.10.0BES1/BZR1 homolog protein 4 isoform X4
SwissprotQ9ZV881e-128BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0V0I4Y20.0A0A0V0I4Y2_SOLCH; Putative BES1/BZR1 protein 4-like
TrEMBLM1CRN80.0M1CRN8_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000732500.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-109BES1/BZR1 homolog 4