PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_208080_qirn.t1
Common NameSOVF_208080
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family NZZ/SPL
Protein Properties Length: 341aa    MW: 37391.2 Da    PI: 9.5047
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_208080_qirn.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE41.82.6e-135122239212
             NOZZLE  39 tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdrgvvlqgfps.slgssrilcggv 129
                        t k rgrk   k+ + kq+k  lrg+g+a ler ++ +e++   + t   t++ ++ + ++t  p   d+ v      s  l +  +    +
  Sp_208080_qirn.t1  51 TPKPRGRKGSGKSQNGKQNKVPLRGVGMAELERLRALDEQQSRSIPTPPTTTTTSSYNHNTTTHP-LTDPRVNPSFHHStPLSGVPV-IRYC 140
                        6799************************************9999999999998888888999999.668877655444423444333.2333 PP

             NOZZLE 130 gsgqvmidpvi.spwgfvetsatth..elssisnpqmynassnnrcdtcfkkkrldgdqnnvvrsng..ggfskytmipppmngydey 212
                          gq + d  i    g+ e++++ +  el s++np   +  s     t fkkkr+ g++  v  s+g  g f  +   p   + y++y
  Sp_208080_qirn.t1 141 LPGQPITDQRItHRVGIPESASAPYypELPSMPNPFQLDHHSSL---TSFKKKRVIGEE-AVGFSKGynGNFGGF--DPKNGDNYNHY 222
                        4678777765515678888877654449*******988887777...9*********99.666665522333322..24444445555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087441.9E-848203IPR014855Plant transcription factor NOZZLE
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048653Biological Processanther development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MATPLHFISS NDPNTPSTNT TNIWPLINQT QSNHYPNLRP VPNSNPNPNP TPKPRGRKGS  60
GKSQNGKQNK VPLRGVGMAE LERLRALDEQ QSRSIPTPPT TTTTSSYNHN TTTHPLTDPR  120
VNPSFHHSTP LSGVPVIRYC LPGQPITDQR ITHRVGIPES ASAPYYPELP SMPNPFQLDH  180
HSSLTSFKKK RVIGEEAVGF SKGYNGNFGG FDPKNGDNYN HYLALNHGGF SSNHTINNGS  240
EVVAIHRKWN GSGNVMMEYG FFPGKSEENT MKFDNDNNSN NYYHKMEDLN LKMGFFSDSS  300
SASPSPSPSQ SPSSSLSSLT TATTTTTSNT SVDLSLKLST Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021835774.10.0protein SPOROCYTELESS
TrEMBLA0A0K9Q8H40.0A0A0K9Q8H4_SPIOL; Uncharacterized protein
STRINGXP_010694475.14e-68(Beta vulgaris)