PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_204130_pgzp.t1 | ||||||||
Common Name | SOVF_204130 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | G2-like | ||||||||
Protein Properties | Length: 174aa MW: 19550.9 Da PI: 6.5052 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 35.6 | 2e-11 | 18 | 42 | 2 | 26 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 prlrWt +LH++Fv+ave+LGG+e+ Sp_204130_pgzp.t1 18 PRLRWTGDLHHCFVRAVERLGGEEN 42 9*********************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.0E-10 | 14 | 42 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MMELKGRGLR PYVRSNAPRL RWTGDLHHCF VRAVERLGGE ENIINGTKMS TNVQETKIVH 60 NNSYVHDNYI PITCNSMVAS PQDVTTNFKQ DGMVQQSHHP YIVFHNLLRR SRPNLAEGYE 120 MNEEVSGYST SITITSSLSD DQHLNASLNL ELSSSCSRIM AAGIQEDVSL DLSL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019106903.1 | 7e-38 | PREDICTED: uncharacterized protein LOC104901034 | ||||
TrEMBL | A0A0K9Q9F7 | 1e-127 | A0A0K9Q9F7_SPIOL; Uncharacterized protein | ||||
STRING | XP_010686880.1 | 4e-37 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 2e-12 | G2-like family protein |