PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_150660_wdog.t1 | ||||||||
Common Name | SOVF_150660 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | ARR-B | ||||||||
Protein Properties | Length: 249aa MW: 28072.4 Da PI: 4.5471 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31.3 | 4.4e-10 | 171 | 216 | 5 | 51 |
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 Wt+ L ++ ++ v+ L G ++AtP ++ + m+v+gLt++ v LQ Sp_150660_wdog.t1 171 TWTSSLEANLIRIVRDL-GVDVATPAELIRRMNVPGLTIDFVIEKLQ 216 7****************.**********************9998888 PP | |||||||
2 | Response_reg | 47 | 1.4e-16 | 11 | 115 | 1 | 105 |
EEEES.SSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS Response_reg 1 vlivd.Deplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89 +l+vd D ++ r+ l+++l+ ++y +v +a +g++al++l++k+ +Dl+l+ ++p+m ++e+l ++ + +lp+++v ++ +++l+ Sp_150660_wdog.t1 11 ILLVDpDTRSSRNTLEVLLD-ANY-RVVTACQGTDALNTLQNKKrkVDLVLMTTKLPDMCAFEVLDILQMNF-RLPVVMVCDTYHGPTMLRF 99 68885377777777777777.***.***************998888**********************9999.9****************** PP HHTTESEEEESS--HH CS Response_reg 90 lkaGakdflsKpfdpe 105 l+ Ga+ +l+Kp p+ Sp_150660_wdog.t1 100 LQNGAMYCLVKPLLPK 115 ************8665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 2.99E-18 | 7 | 124 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 2.5E-18 | 8 | 126 | No hit | No description |
SMART | SM00448 | 1.6E-7 | 9 | 121 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 23.263 | 10 | 125 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 8.3E-12 | 11 | 117 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 2.63E-11 | 12 | 115 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 6.8E-8 | 170 | 217 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MDVKSFTDIC ILLVDPDTRS SRNTLEVLLD ANYRVVTACQ GTDALNTLQN KKRKVDLVLM 60 TTKLPDMCAF EVLDILQMNF RLPVVMVCDT YHGPTMLRFL QNGAMYCLVK PLLPKNVKTL 120 WQHSIIMERE LNRDYCESPL LEFTDKEAEN HQAEELDKGE GSSTGLSSSF TWTSSLEANL 180 IRIVRDLGVD VATPAELIRR MNVPGLTIDF VIEKLQELEI YPETLELQFN SVTVSPTPAP 240 HPIAGPEMP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021860515.1 | 0.0 | two-component response regulator ORR21-like isoform X1 | ||||
TrEMBL | A0A0K9QR32 | 0.0 | A0A0K9QR32_SPIOL; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 8e-22 | response regulator 2 |