PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_132770_zpjm.t1
Common NameSOVF_132770
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 376aa    MW: 42057.8 Da    PI: 9.3456
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_132770_zpjm.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1231.7e-072422801755
                        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                        A+rsR RK+++i+eLe+ v++L+ae ++   +le l+++
  Sp_132770_zpjm.t1 242 AQRSRVRKLQYIAELETNVQALQAEGSEVSAQLEFLNQQ 280
                        89***********************99999888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0014231290IPR004827Basic-leucine zipper domain
CDDcd147031.59E-15233281No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-6242285No hitNo description
SuperFamilySSF579598.44E-6242284No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MANPKGSANF RNLMQNGKNS LLPPKSPFPS ITPSYPDYGP NTCLGSKLAS KCRDGNAYHQ  60
RTSSESVIDE QPSWLDELLN EPDTPVRKGH RRSSSDSFAY LDAASMSNID YMPVSRDESK  120
FRPMVSAPLW GSQNFDLMRE APQGSLYHDS NFYGKRNKNR ALELKLTPPN HTSGLRLSRD  180
NVIIQSTGGS SALLEANPIP VEKQDQSESG SYDLRTSSEK KDGSHAKTPS ENDTKRAKQQ  240
FAQRSRVRKL QYIAELETNV QALQAEGSEV SAQLEFLNQQ NLILSMENKA LKQRLDNLAQ  300
EKLIKYLEHE VLEREIGRLR ALYQQQQQPP PPPPQRPSSS HRRTNSRDLD SQFANLSLRP  360
KEASSGSDSF SGPVGI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021862848.10.0uncharacterized protein At4g06598
TrEMBLA0A0K9QWP70.0A0A0K9QWP7_SPIOL; Uncharacterized protein
STRINGXP_010691351.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-102bZIP family protein