PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_086740_dfxs.t1 | ||||||||
Common Name | SOVF_086740 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | bZIP | ||||||||
Protein Properties | Length: 199aa MW: 22663.2 Da PI: 7.926 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 56.6 | 5.7e-18 | 129 | 177 | 4 | 52 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++r +r+ kNRe+A+rsR+RK+a++ eLe +v+ L eN+aL+k+ ++l Sp_086740_dfxs.t1 129 DRRHKRMVKNRESASRSRARKQAYVTELEVEVDRLRVENEALRKQQQQL 177 799*****************************************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.6E-11 | 126 | 190 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.047 | 128 | 180 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.4E-16 | 129 | 178 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 130 | 178 | No hit | No description |
CDD | cd14707 | 4.47E-22 | 130 | 177 | No hit | No description |
SuperFamily | SSF57959 | 1.31E-12 | 130 | 178 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 133 | 148 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MEEVWNDITM NSLPNTPISH IHTIRHPPTS SGAPHFRGFI FQDFLNAGPL QNTSSIDSSP 60 PPPQPPPWQT RPAATEFQFL DNNELFNSQS HHFRLHGNSS VPTSLAPAVG QNVMNSKRCS 120 DRDEDEHVDR RHKRMVKNRE SASRSRARKQ AYVTELEVEV DRLRVENEAL RKQQQQLIED 180 PPAQLPTKHG LHRTSSAPF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021854644.1 | 1e-146 | protein FD-like | ||||
TrEMBL | A0A0K9RCJ3 | 1e-145 | A0A0K9RCJ3_SPIOL; Uncharacterized protein | ||||
STRING | XP_010680407.1 | 1e-54 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 5e-17 | bZIP family protein |