PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sp_014620_dsee.t1

Common Name

SOVF_014620

Organism

Spinacia oleracea

Taxonomic ID

3562

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia

Family

bZIP

Protein Properties

Length: 294aa MW: 33118.4 Da PI: 7.4597

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sp_014620_dsee.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.3	1.2e-06	179	224	18	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +rsR+RK+++i+eLe+ v ++++ ++L+ +++ l ++ a+l e+ Sp_014620_dsee.t1 179 QRSRARKLQYIAELERTVNVFQTLESELAVRVSALLQQKAALLLEN 224 79******************************99999988887766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	3.54E-11	174	211	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.8E-5	179	220	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence Send to blast
MSRPSQLPPR CPLQKKAAAR KTLEPSSNNC RGFNKSGGRH QRSLSQSSVF EEQPAWIDDL 60 LSDSDSVPEG IYHCRSASDS FTLLDSIVPN MLLSEEGFVD DGNILGSGCI YGPNSPRRRS 120 NLEFTDNTVL LAMSDYVNQS PMQFVDEIPR SPFDLKDHFC DSPNYFSIDA KTGKRHPGQR 180 SRARKLQYIA ELERTVNVFQ TLESELAVRV SALLQQKAAL LLENNKLKQK MTLLQQEKLL 240 MDGEYQNLRD EAEMLKLGLA KSVSSSKIRT SVDANNSDST KITWQSLDWT KLHM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021857142.1	0.0	uncharacterized protein At4g06598
Refseq	XP_021857143.1	0.0	uncharacterized protein At4g06598
TrEMBL	A0A0K9RYE5	0.0	A0A0K9RYE5_SPIOL; Uncharacterized protein
STRING	XP_010680762.1	1e-108	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	7e-12	bZIP family protein