PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 68227
Common NameBLH2-1, SELMODRAFT_68227
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family TALE
Protein Properties Length: 178aa    MW: 20556.7 Da    PI: 10.1504
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
68227genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.21.3e-081441771950
               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHH CS
  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqN 50 
               Fe   ++yp+ +++  LA+++gLt +qV++WF N
     68227 144 FEHflHPYPKDADKMMLARQTGLTRSQVSNWFIN 177
               665559**************************98 PP

2BELL125.42.2e-40576172
   BELL  1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
           e+qel+ kk+kL+ +l+eVd+rY+qy++q+q+vissF+avag+g+a+pYt+lAl+a+Sr FrcLkdai++qi
  68227  5 EKQELETKKSKLIAMLQEVDRRYRQYYDQMQVVISSFDAVAGVGAATPYTALALQAMSRYFRCLKDAITGQI 76
           689********************************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075261.7E-36173IPR006563POX domain
SMARTSM005741.9E-19274IPR006563POX domain
SuperFamilySSF466899.84E-14119178IPR009057Homeodomain-like
PROSITE profilePS5007110.787122178IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-22124178IPR009057Homeodomain-like
CDDcd000865.18E-9125178No hitNo description
PfamPF059201.2E-16142178IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
LSAEEKQELE TKKSKLIAML QEVDRRYRQY YDQMQVVISS FDAVAGVGAA TPYTALALQA  60
MSRYFRCLKD AITGQISLVC KSLGEEDISK QITTKSPTSR LRFIDQQIRQ QRAFQQLGML  120
NQHAWRPQRG LPERSVSILR AWLFEHFLHP YPKDADKMML ARQTGLTRSQ VSNWFINA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002969077.21e-125BEL1-like homeodomain protein 2
RefseqXP_002992851.21e-126BEL1-like homeodomain protein 2
RefseqXP_024529520.11e-125BEL1-like homeodomain protein 2
SwissprotQ9SIW12e-83BLH7_ARATH; BEL1-like homeodomain protein 7
TrEMBLD8RCT51e-130D8RCT5_SELML; Uncharacterized protein BLH2-1 (Fragment)
STRINGEFJ301931e-131(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13316172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.19e-73BEL1-like homeodomain 7
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]