PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

437216

Common Name

BEH1-1, SELMODRAFT_437216

Organism

Selaginella moellendorffii

Taxonomic ID

88036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella

Family

BES1

Protein Properties

Length: 531aa MW: 55292.9 Da PI: 8.3118

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
437216	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	172.2	2.8e-53	3	116	2	113
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags.sasaspesslq.sslkssa 102 ++ r ptwkErEnnk+RERrRRaia+ki++GLR+ Gnyklpk++DnneVlkALc+eAGwvve+DGttyrkg kp e++e+ s as sp+ss++ + + 437216 3 SGARLPTWKERENNKKRERRRRAIASKIFSGLRQFGNYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGAKPVERMEVCASaPASPSPTSSYHgGGSNGHT 105 789**********************************************************************9998766515679****955555555 PP DUF822 103 laspvesysas 113 l++ +++ + + 437216 106 LTTTTPTEQGT 116 55555444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.0E-50	4	117	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence Send to blast
MTSGARLPTW KERENNKKRE RRRRAIASKI FSGLRQFGNY KLPKHCDNNE VLKALCAEAG 60 WVVEEDGTTY RKGAKPVERM EVCASAPASP SPTSSYHGGG SNGHTLTTTT PTEQGTTTAS 120 GASLIPWLKG LSGTTTPTSC FHGASSAPVT PPLSSPKGSK PFSLNGGGGA IAPAPLVHAH 180 HPTGVKNHQQ AEWDRVTMAE HWLDSTTGYG NASGSWSPVI VGPAIPSPSA ARANVVRPCE 240 TPDGCMTPCS DVGDSEPNVT ELLSRYSGNK SGRWINGMRV VVNPSSAAAA AAVSAAPSNN 300 HHANVSVNLT GHHSPGILSG FGSNSMVPTI SSSGTATPTA GRSYGQHQHQ HHLEQHHHHF 360 VDSGGGGWMK PAGATAASLP LASSGSGFPT APAQQQAQAL ASHHAHAHMV FHAGGGFHER 420 DNNFYATNTA AAAAAAANTT TPNNSNGDVD EDHQQQQQQQ QQCSPCSSSV CGVVVETGKR 480 KRSLHELDLE MTSSITRLQA MATNDSNAPG RNATISDRLQ LTLATPASSS *

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence Send to blast

MTSGARLPTW KERENNKKRE RRRRAIASKI FSGLRQFGNY KLPKHCDNNE VLKALCAEAG  60
WVVEEDGTTY RKGAKPVERM EVCASAPASP SPTSSYHGGG SNGHTLTTTT PTEQGTTTAS  120
GASLIPWLKG LSGTTTPTSC FHGASSAPVT PPLSSPKGSK PFSLNGGGGA IAPAPLVHAH  180
HPTGVKNHQQ AEWDRVTMAE HWLDSTTGYG NASGSWSPVI VGPAIPSPSA ARANVVRPCE  240
TPDGCMTPCS DVGDSEPNVT ELLSRYSGNK SGRWINGMRV VVNPSSAAAA AAVSAAPSNN  300
HHANVSVNLT GHHSPGILSG FGSNSMVPTI SSSGTATPTA GRSYGQHQHQ HHLEQHHHHF  360
VDSGGGGWMK PAGATAASLP LASSGSGFPT APAQQQAQAL ASHHAHAHMV FHAGGGFHER  420
DNNFYATNTA AAAAAAANTT TPNNSNGDVD EDHQQQQQQQ QQCSPCSSSV CGVVVETGKR  480
KRSLHELDLE MTSSITRLQA MATNDSNAPG RNATISDRLQ LTLATPASSS *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002960716.1	0.0	uncharacterized protein LOC9656504
TrEMBL	D8QPC6	0.0	D8QPC6_SELML; Uncharacterized protein BEH1-1
STRING	EFJ38255	0.0	(Selaginella moellendorffii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP1595	15	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	2e-32	BES1/BZR1 homolog 3

Link Out ? help Back to Top
Phytozome	437216
Entrez Gene	9656504

Publications ? help Back to Top
Banks JA, et al. The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science, 2011. 332(6032): p. 960-3 [PMID:21551031]