PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

429765

Common Name

BEH3-1, SELMODRAFT_429765

Organism

Selaginella moellendorffii

Taxonomic ID

88036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella

Family

BES1

Protein Properties

Length: 332aa MW: 36243.3 Da PI: 9.6913

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
429765	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	157.6	8.5e-49	40	165	5	131
DUF822 5 rkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspv 107 r+pt++ErEnnk+RERrRRa+aaki+aGLRa+G+y+lpk+aD neVlkALc eAGw ve+DGt y+kg++ + + + ssa+ +s+++ssl+s + 429765 40 RNPTERERENNKKRERRRRAVAAKIFAGLRAHGGYALPKHADHNEVLKALCDEAGWHVEEDGTIYKKGCSEMMKRAKETSSAKPLETSPSSSSLNSRQHDQSE 142 99**********************************************************************6666667777777777766666665554444 PP DUF822 108 esysaspksssfpspssldsisla 131 +s+ +++ ++ + ++ ++ + + 429765 143 TSSGEDLSARKKSHHQQQQQ-QQQ 165 44433333332222222222.222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.2E-41	40	153	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence Send to blast
MEESASSRPG RKCTVRGCIK PTSGPWKVKR PAGKGGVVWR NPTERERENN KKRERRRRAV 60 AAKIFAGLRA HGGYALPKHA DHNEVLKALC DEAGWHVEED GTIYKKGCSE MMKRAKETSS 120 AKPLETSPSS SSLNSRQHDQ SETSSGEDLS ARKKSHHQQQ QQQQQNALRD LLAHRQSSLA 180 IGADHASAIY SFQDCQSRLG SPRSSTPAAS PPPFPAAALS LEHQFLPLAR HDHAFALPVF 240 PVDHARSLNQ SCVPSYNVKE ELLSQHDQAS FYPSRRFVVA NHQLLEESKG IGSSPAAAAN 300 YNTESISTPS SSSNAENLDG LSLTLYTSSS K*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-18	40	120	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-18	40	120	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-18	40	120	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-18	40	120	372	452	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	D8T780	0.0	D8T780_SELML; Uncharacterized protein BEH3-1
STRING	EFJ07517	0.0	(Selaginella moellendorffii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP10084	10	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	2e-21	BES1 family protein

Link Out ? help Back to Top
Phytozome	429765
Entrez Gene	9639520

Publications ? help Back to Top
Banks JA, et al. The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science, 2011. 332(6032): p. 960-3 [PMID:21551031]