PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

414095

Common Name

BEH5-1, SELMODRAFT_414095

Organism

Selaginella moellendorffii

Taxonomic ID

88036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella

Family

BES1

Protein Properties

Length: 333aa MW: 35476.1 Da PI: 10.1006

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
414095	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	127.4	1.8e-39	6	126	9	129
DUF822 9 wkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasaspesslqsslkssalaspve 108 + E+E++k RER+RRai+++i++GLR++G+y+lp raD+n+Vl+AL+ eAGw+ve DGttyr ++ + ++++ + s+ p+s + ++++s ++ 414095 6 AAEKEKTKIRERHRRAITTRIFTGLRKHGGYNLPPRADINDVLRALAGEAGWIVETDGTTYRPQQDQSshsQQHQKVALSQISLPQSGGS---GRTTTTSLTN 105 57************************************************************4444441112222222233333333333...2233334444 PP DUF822 109 sysaspksssfpspssldsis 129 + ++ + ++ + + ++++ 414095 106 TTHSISSGGHHHHHHHHQQMN 126 444444444444444444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	8.3E-33	7	109	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MGKLSAAEKE KTKIRERHRR AITTRIFTGL RKHGGYNLPP RADINDVLRA LAGEAGWIVE 60 TDGTTYRPQQ DQSSHSQQHQ KVALSQISLP QSGGSGRTTT TSLTNTTHSI SSGGHHHHHH 120 HHQQMNLAAA GRYLLSPSHL MLQQQQMDPR AGDCSTTASP RHHYMSSSSM PPLLQGAATT 180 ATTTTTTNSG LSTSPLASPA SSEGTGARPG GIRSASAAAS AANNHNFFGQ FHHLPYGLTL 240 DRADSTDQDA VTAWMTDIGT AGGTADHLPR SAQLSNLIYS MQQQHAARLA SGATSRAATP 300 PAYGTAQLLH YSMQEQRASN HNTPLGSPQR HC*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	6e-12	21	67	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	6e-12	21	67	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	6e-12	21	67	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	6e-12	21	67	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002975808.1	0.0	protein BZR1 homolog 4 isoform X1
TrEMBL	D8RRM3	0.0	D8RRM3_SELML; Uncharacterized protein BEH5-1
STRING	EFJ25420	0.0	(Selaginella moellendorffii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP10087	8	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	5e-22	beta-amylase 7

Link Out ? help Back to Top
Phytozome	414095
Entrez Gene	9642822

Publications ? help Back to Top
Banks JA, et al. The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science, 2011. 332(6032): p. 960-3 [PMID:21551031]