PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 412326 | ||||||||
Common Name | SELMODRAFT_412326 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 28573.6 Da PI: 5.9956 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.1 | 0.00036 | 227 | 252 | 4 | 29 |
HHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 4 ahnerErrRRdriNsafeeLrellPk 29 +h +Er RR++ + +++L++ +P+ 412326 227 NHMLAERSRRSKESEHLATLKKFIPQ 252 68899********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 8.594 | 223 | 258 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MEMEALYDPE AWSFPGAATG HESAFSLSSA GASSGGGFLE PNDDHELQAH IQQLSRSFDG 60 TEAFQLFDHD SIVVQGLSRV DFPLETGRGA GFQQQHFEQP LPVMAVKEEA VPVEQVEIHP 120 GKAFQYWSPG IESTAHTHGH GCRKKSMACS ILDLYRQVHE REQLQSRASS SSAAPEDVTL 180 QQQHQQQQLE IQAPSSQVAQ AQDLQHQPLI QFQSNPRAPA QTPASYNHML AERSRRSKES 240 EHLATLKKFI PQGTLKKV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002971748.2 | 0.0 | uncharacterized protein LOC9640000 | ||||
TrEMBL | D8RKT0 | 0.0 | D8RKT0_SELML; Uncharacterized protein | ||||
STRING | EFJ27497 | 0.0 | (Selaginella moellendorffii) |
Link Out ? help Back to Top | |
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Phytozome | 412326 |
Entrez Gene | 9640000 |
Publications ? help Back to Top | |||
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