PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

407084

Common Name

BEH2-1, SELMODRAFT_407084

Organism

Selaginella moellendorffii

Taxonomic ID

88036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella

Family

BES1

Protein Properties

Length: 359aa MW: 37935.7 Da PI: 8.4046

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
407084	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	166.9	1.2e-51	2	100	1	98
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.ssl 98 +++ r+pt +ErEnnkrRERrRRaiaaki+ GLR+ Gny+lpk++DnneVlkALcreAGwvvedDGttyrkgs+p+e+ +a s ++ss+ ++ 407084 2 TSGSRTPTFRERENNKRRERRRRAIAAKIFNGLRQLGNYNLPKHCDNNEVLKALCREAGWVVEDDGTTYRKGSRPMERLDACASGPASPTSSSYRaLTE 100 5789************************************************************************88877776666666666664444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.8E-48	4	98	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
MTSGSRTPTF RERENNKRRE RRRRAIAAKI FNGLRQLGNY NLPKHCDNNE VLKALCREAG 60 WVVEDDGTTY RKGSRPMERL DACASGPASP TSSSYRALTE RSSLIGWLNG LSTNGGPSNP 120 GGAATALPPL HWHHSAPVTP PLDSPRAAAA GTAASLKPDW DNACVTPTFI TSSVPRGTGG 180 GGGGGDGGCD TPVSDVGDSD YSALEFWSRY RESTGRWVNG MRVGGSAGSS NWFSGSATPD 240 YSGSVTPNYG YANFAANQHQ LPPFPPRQQP QHQQQHQINL NHNQCDSSPI HHRQGGTQSS 300 PCSSMCGVVF NNSSNNGEVV SPPPPPPGGS VLAHNLGDAA VRIVDRLELT LATPASSP*

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

MTSGSRTPTF RERENNKRRE RRRRAIAAKI FNGLRQLGNY NLPKHCDNNE VLKALCREAG  60
WVVEDDGTTY RKGSRPMERL DACASGPASP TSSSYRALTE RSSLIGWLNG LSTNGGPSNP  120
GGAATALPPL HWHHSAPVTP PLDSPRAAAA GTAASLKPDW DNACVTPTFI TSSVPRGTGG  180
GGGGGDGGCD TPVSDVGDSD YSALEFWSRY RESTGRWVNG MRVGGSAGSS NWFSGSATPD  240
YSGSVTPNYG YANFAANQHQ LPPFPPRQQP QHQQQHQINL NHNQCDSSPI HHRQGGTQSS  300
PCSSMCGVVF NNSSNNGEVV SPPPPPPGGS VLAHNLGDAA VRIVDRLELT LATPASSP*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	7e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	7e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	7e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	7e-22	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002965931.1	0.0	protein BZR1 homolog 1
TrEMBL	D8R3V5	0.0	D8R3V5_SELML; Uncharacterized protein BEH2-1
STRING	EFJ33351	0.0	(Selaginella moellendorffii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP1595	15	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	3e-30	BES1/BZR1 homolog 3

Link Out ? help Back to Top
Phytozome	407084
Entrez Gene	9635998

Publications ? help Back to Top
Banks JA, et al. The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science, 2011. 332(6032): p. 960-3 [PMID:21551031]