PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 108669 | ||||||||
Common Name | SELMODRAFT_108669, WRKY_19 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | WRKY | ||||||||
Protein Properties | Length: 62aa MW: 6621.38 Da PI: 8.9147 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 49 | 1.2e-15 | 5 | 48 | 4 | 46 |
SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTT CS WRKY 4 gynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpk 46 g + +K q +kgs++pr+YY+C+s gCp++k+ver+ +dp+ 108669 5 GGTHQKASQAGIKGSPHPRGYYKCSSLrGCPARKHVERCLDDPT 48 55667888999**************998************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 17.098 | 1 | 59 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.02E-13 | 4 | 48 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.6E-15 | 4 | 48 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-12 | 6 | 47 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-7 | 16 | 58 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 62 aa Download sequence Send to blast |
MFLDGGTHQK ASQAGIKGSP HPRGYYKCSS LRGCPARKHV ERCLDDPTTD AGERSHGVQP 60 Q* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002970246.1 | 2e-21 | probable WRKY transcription factor 11 | ||||
Refseq | XP_024531200.1 | 2e-21 | probable WRKY transcription factor 11 | ||||
Swissprot | Q32SG4 | 9e-17 | WRKY1_MAIZE; Protein WRKY1 | ||||
TrEMBL | D8S545 | 8e-38 | D8S545_SELML; Uncharacterized protein WRKY_19 | ||||
STRING | EFJ20540 | 1e-38 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.2 | 2e-18 | WRKY DNA-binding protein 11 |
Link Out ? help Back to Top | |
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Phytozome | 108669 |
Entrez Gene | 9653707 |
Publications ? help Back to Top | |||
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