PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00029031-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family ERF
Protein Properties Length: 111aa    MW: 11829.3 Da    PI: 9.9364
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00029031-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.6e-171464155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           ++ykGVr++k +g+Wv+eIr+p   g +  r +lg++ tae Aa a++ a  +l+g
  SMil_00029031-RA_Salv 14 TKYKGVRRRK-WGKWVSEIRVP---G-SqHRLWLGSYATAEAAAVAHDVATYCLRG 64
                           69*****998.**********8...4.35*********************999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.1E-111464IPR001471AP2/ERF domain
CDDcd000184.73E-181474No hitNo description
SMARTSM003805.9E-291580IPR001471AP2/ERF domain
PROSITE profilePS5103222.0231574IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-271574IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-181575IPR016177DNA-binding domain
PRINTSPR003678.3E-91627IPR001471AP2/ERF domain
PRINTSPR003678.3E-93854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MSSSSNTEDS AADTKYKGVR RRKWGKWVSE IRVPGSQHRL WLGSYATAEA AAVAHDVATY  60
CLRGDSSLQK LNFPLVLPAG AKFGLSPSSV QKVASDAGLA VDAQLWTSSS S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1411741072Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11622KGVRRRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.17e-51PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I82e-38ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A022Q2952e-49A0A022Q295_ERYGU; Uncharacterized protein
STRINGMigut.C01360.1.p3e-50(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.15e-31ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]