PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00028257-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | Nin-like | ||||||||
Protein Properties | Length: 246aa MW: 28291 Da PI: 4.7524 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 82.4 | 4.4e-26 | 82 | 131 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i e++skyF +pi++AA+eL+v+lT LKr+CR++GI+RWPhRk+ksl SMil_00028257-RA_Salv 82 EDICREMISKYFIMPIAEAARELNVGLTFLKRKCRELGIRRWPHRKLKSL 131 67899*******************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.712 | 65 | 151 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.7E-21 | 84 | 131 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
METHFVDQDV FSFQTELPLV DHLSACCGYG AWDLEYDVSY ADVFLSDPSF TSLDYNILLI 60 PDGLNEQMLE PMGEKGSKHK NEDICREMIS KYFIMPIAEA ARELNVGLTF LKRKCRELGI 120 RRWPHRKLKS LQALIDNLKE MGEENTVETR EYLEQEKMLI LEAPNTQMGT RTKRLRQTCF 180 KTNYKKRRLM GNGNTNSNCP QLTSFTINLE QSIQDLSHFN DDGDDEIMAF YSDFASSSDS 240 IGHGIV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G9H3R8 | 6e-42 | A0A2G9H3R8_9LAMI; Uncharacterized protein | ||||
STRING | Migut.D01815.1.p | 1e-40 | (Erythranthe guttata) | ||||
STRING | XP_004301148.1 | 7e-40 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4274 | 21 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 2e-37 | RWP-RK domain-containing protein |