PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00027717-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22270.8 Da PI: 9.7828 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6.1e-18 | 77 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 sgy+GV d ++grW AeIrd r r++lg+f+taeeAa+a +aa+++++g SMil_00027717-RA_Salv 77 SGYRGVGEDGRWGRWSAEIRDrI----GRCRHWLGTFDTAEEAARALDAAARRMKG 128 89****99*************32....25*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 26 | No hit | No description |
SuperFamily | SSF54171 | 3.86E-17 | 77 | 137 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 7.1E-12 | 77 | 128 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.203 | 78 | 136 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.6E-20 | 78 | 145 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-23 | 79 | 136 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MNKNSNFDLS ENGHELLHFH PSSSSCNRSP NRVEIDYAEI DRRSPPVLEG IAAVVGERVL 60 FGDKVERESG SNRRKTSGYR GVGEDGRWGR WSAEIRDRIG RCRHWLGTFD TAEEAARALD 120 AAARRMKGSG ARTNFQIPPI LPSPSSSCSD QPRRRIRAKT RGKCSVVTCA AHLFSPNFAA 180 DATNDVGLEL QDGGFGNKNR VS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017978247.1 | 2e-39 | PREDICTED: ethylene-responsive transcription factor ERF084 | ||||
Swissprot | Q9M8M5 | 5e-26 | ERF84_ARATH; Ethylene-responsive transcription factor ERF084 | ||||
TrEMBL | A0A4D9AD22 | 4e-66 | A0A4D9AD22_SALSN; EREBP-like factor | ||||
STRING | EOY25976 | 8e-39 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11552 | 22 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 1e-22 | ERF family protein |