PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00027160-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 89aa MW: 9759.96 Da PI: 8.6236 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105 | 4.6e-33 | 23 | 80 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 ++vrY eC+kNhAa++Gg+avDGC+Efm+ g+egtaaal CaACgCHRnFHRreve e SMil_00027160-RA_Salv 23 QTVRYGECQKNHAANIGGYAVDGCREFMAG-GAEGTAAALSCAACGCHRNFHRREVERE 80 579**************************9.999*********************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 7.0E-27 | 1 | 89 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 1.8E-30 | 25 | 77 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 5.1E-26 | 26 | 77 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 25.397 | 27 | 76 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence Send to blast |
MKKRQVVMRK ETCHRSSSNQ VIQTVRYGEC QKNHAANIGG YAVDGCREFM AGGAEGTAAA 60 LSCAACGCHR NFHRREVERE VINDTSSPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017975895.1 | 5e-41 | PREDICTED: mini zinc finger protein 2 | ||||
Refseq | XP_021297644.1 | 6e-41 | mini zinc finger protein 2-like | ||||
Swissprot | Q9LJW5 | 5e-35 | MIF2_ARATH; Mini zinc finger protein 2 | ||||
TrEMBL | A0A4D9AAA4 | 5e-42 | A0A4D9AAA4_SALSN; Uncharacterized protein | ||||
TrEMBL | A0A4D9C390 | 9e-42 | A0A4D9C390_SALSN; Uncharacterized protein | ||||
STRING | EOY03457 | 3e-40 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1105 | 24 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 2e-37 | mini zinc finger 2 |
Publications ? help Back to Top | |||
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