PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00027123-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 145aa MW: 16277.8 Da PI: 9.7731 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 28 | 78 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +gr++AeIrd + + +r++lg+fgtaeeAa+a+++a+ ++g+ SMil_00027123-RA_Salv 28 VPGVRRRP-WGRYAAEIRDS---NrHGARVWLGTFGTAEEAARAYDRAAYTMRGH 78 78******.**********4...3234**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 21.601 | 27 | 85 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.1E-9 | 28 | 39 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.9E-16 | 28 | 78 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.77E-22 | 29 | 87 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.35E-14 | 30 | 85 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 8.1E-29 | 30 | 87 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-28 | 30 | 91 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.1E-9 | 51 | 67 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence Send to blast |
MAETHGASRD GRKSQRRWQE RQRRGGEVPG VRRRPWGRYA AEIRDSNRHG ARVWLGTFGT 60 AEEAARAYDR AAYTMRGHLA VLNFPQEYPA FASQSSSSSS SSAAAASSST SRNEAEQGKQ 120 VFEFEYLDDK LLEDLLEFGE KNTSK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-35 | 26 | 131 | 13 | 114 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012835886.1 | 1e-45 | PREDICTED: ethylene-responsive transcription factor ERF096-like | ||||
Swissprot | Q9LTC5 | 6e-38 | ERF98_ARATH; Ethylene-responsive transcription factor ERF098 | ||||
TrEMBL | A0A4D9AVX7 | 3e-58 | A0A4D9AVX7_SALSN; Pathogenesis-related proteins transcriptional activator PTI5 | ||||
STRING | Migut.D00418.1.p | 4e-45 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23220.1 | 2e-13 | ERF family protein |
Publications ? help Back to Top | |||
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