PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00025020-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | GeBP | ||||||||
Protein Properties | Length: 245aa MW: 27966.4 Da PI: 9.3592 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 48.2 | 3e-15 | 50 | 137 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisf.kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 +++++s+eD i+lL+ l f a+ + + +f+++vk+++s ++++ q++eK+r+L kK+k+++++ g + +++h+ ++ SMil_00025020-RA_Salv 50 SSKVFSDEDSITLLKSLAVFWASGR---NNKWADFHRIVKDKLSKpDFTRVQISEKVRSLNKKYKTNWQR---G--RVPDNPHELVVY 129 6799****************66544...468999********98648***********************...4..456799****** PP DUF573 90 elskkiWg 97 elsk +W+ SMil_00025020-RA_Salv 130 ELSKPLWE 137 *******7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.8E-15 | 51 | 137 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MSAKENEMRK QGDSDCSSDS GGDSDCSSDS GSGAQAMTLA LKPKHPPPSS SKVFSDEDSI 60 TLLKSLAVFW ASGRNNKWAD FHRIVKDKLS KPDFTRVQIS EKVRSLNKKY KTNWQRGRVP 120 DNPHELVVYE LSKPLWEDEM NQESGKVWED EMNQESGKGM KKNKKRKRER NPTLDEFRSS 180 YPNLYASFNM FGFPKIARKR CVLLGREKAQ KLENEWKQLT EELHCLEGKR LALSTKPTGD 240 NSEEG |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13664 | 4 | 13 |