PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00024806-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 79aa MW: 8944.41 Da PI: 9.5888 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.4 | 1.8e-13 | 32 | 78 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 ++ykGV+ +k +g++v eI+ p + + r++l++++tae+Aa+a +aa SMil_00024806-RA_Salv 32 CKYKGVCKRK-WGKYVFEIKLP---N-CrERIWLESYDTAEKAARAFVAALY 78 79*****999.*******9997...3.45*****************999975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.2E-7 | 32 | 76 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.46E-15 | 32 | 77 | No hit | No description |
PROSITE profile | PS51032 | 14.579 | 33 | 79 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.3E-6 | 33 | 79 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.03E-11 | 33 | 78 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.9E-16 | 33 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-7 | 34 | 45 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-7 | 56 | 72 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence Send to blast |
MMKSREKQQQ PSCSATVAAL VVVQEASSSS SCKYKGVCKR KWGKYVFEIK LPNCRERIWL 60 ESYDTAEKAA RAFVAALYC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093871.1 | 9e-28 | ethylene-responsive transcription factor ERF017-like | ||||
Swissprot | Q84QC2 | 5e-23 | ERF17_ARATH; Ethylene-responsive transcription factor ERF017 | ||||
TrEMBL | A0A4D9AH88 | 2e-28 | A0A4D9AH88_SALSN; Uncharacterized protein | ||||
STRING | VIT_11s0016g00660.t01 | 1e-22 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1939 | 24 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-25 | ERF family protein |
Publications ? help Back to Top | |||
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