PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00024488-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family HB-other
Protein Properties Length: 167aa    MW: 19360 Da    PI: 9.9754
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00024488-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.84.9e-053563129
                           TT--SS--HHHHHHHHHHHHHSSS--HHH CS
               Homeobox  1 rrkRttftkeqleeLeelFeknrypsaee 29
                           rrk+ ++tkeq + Lee F++n++++ ++
  SMil_00024488-RA_Salv 35 RRKKLRLTKEQSRLLEESFKQNHTLNPRR 63
                           79999*******************99765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-41663IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MKELDINQVP SSGTDEECME EEKEEGESPN RGLARRKKLR LTKEQSRLLE ESFKQNHTLN  60
PRRYKGARLD VFRSMRNMRP AWVASRGQSK LVWVTPSVQQ QNFHKQQRHF HLQTWAFQRN  120
PVALMGGNYA LDTLVWGNIS LVEVAVFVDL TLDQGMSLVP HIRSSVE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022776390.13e-16homeobox-leucine zipper protein HOX3-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70920.15e-13homeobox-leucine zipper protein 18