PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00024298-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | Dof | ||||||||
Protein Properties | Length: 187aa MW: 21196 Da PI: 9.5177 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.9 | 1.9e-37 | 16 | 73 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + l+cprC+s+ntkfCyynnyslsqPr+fC+aC+ryWt+GG+lrnvP+Ggg rk kk SMil_00024298-RA_Salv 16 DPLPCPRCNSSNTKFCYYNNYSLSQPRHFCRACKRYWTRGGTLRNVPIGGGYRKTKKF 73 5789***************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 3.8E-33 | 17 | 72 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.947 | 18 | 72 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 8.0E-24 | 18 | 72 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 20 | 56 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MASLSANSVM QRSEADPLPC PRCNSSNTKF CYYNNYSLSQ PRHFCRACKR YWTRGGTLRN 60 VPIGGGYRKT KKFKRPPPPP APNPFHTMHM APLHLNFPFL ETRVSSDTPR FDHTHAPKSG 120 FSPYFRNGFE QNIEDRADFI GFGSSNFAQQ MPCEEMQVVV GSGQIGNQIE QISSSSFYGI 180 QRRCCLV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020554179.1 | 2e-38 | LOW QUALITY PROTEIN: dof zinc finger protein DOF1.4-like | ||||
TrEMBL | A0A2G9G7Z7 | 1e-35 | A0A2G9G7Z7_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28310.1 | 9e-34 | Dof family protein |