PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00024288-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

BES1

Protein Properties

Length: 413aa MW: 44776.3 Da PI: 9.0105

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00024288-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	157.1	1.2e-48	2	74	1	73
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgs 73 ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGwvve+DGttyr+ SMil_00024288-RA_Salv 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRQVR 74 5899******************************************************************754 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.1E-53	3	229	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WVVEEDGTTY RQVRSIGTSC SKMRWMRTGE VSGVGSGPRG MYRETRAAGC SGRIRRTSDG 120 VRCRGREHVT VLLLLCVQYK FTASEFDALL HRTAYEARLD RLRGCKPVER MDIMGSAAVS 180 PCSSYQPSPG ASFNPSPASS SFASPSHYGA NANNPTDPNS LIPWLKNLSS GSLPASKLPH 240 NLYIPGGSIS APVTPPLSSP TARTPRMNGN WDDPTAGSAW CGQNFPFLPS STPQSPGLQT 300 PPESGWLSGV QTPQDGPSSP TFSLVSANPF GFKEPFSNGG SRMWTPGQSG TCSPAIRAGV 360 DQTADIPMSD AISAEFAFGS NHMGLVKPWE GERIHDECVP DDLELTLGNS TTR

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence Send to blast

MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WVVEEDGTTY RQVRSIGTSC SKMRWMRTGE VSGVGSGPRG MYRETRAAGC SGRIRRTSDG  120
VRCRGREHVT VLLLLCVQYK FTASEFDALL HRTAYEARLD RLRGCKPVER MDIMGSAAVS  180
PCSSYQPSPG ASFNPSPASS SFASPSHYGA NANNPTDPNS LIPWLKNLSS GSLPASKLPH  240
NLYIPGGSIS APVTPPLSSP TARTPRMNGN WDDPTAGSAW CGQNFPFLPS STPQSPGLQT  300
PPESGWLSGV QTPQDGPSSP TFSLVSANPF GFKEPFSNGG SRMWTPGQSG TCSPAIRAGV  360
DQTADIPMSD AISAEFAFGS NHMGLVKPWE GERIHDECVP DDLELTLGNS TTR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-19	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-19	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-19	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-19	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011101448.1	1e-145	BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88	2e-87	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A4D9B5R7	0.0	A0A4D9B5R7_SALSN; Uncharacterized protein
STRING	Migut.M00997.1.p	1e-135	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1984	24	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-76	BES1/BZR1 homolog 4