PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00023990-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | Nin-like | ||||||||
Protein Properties | Length: 182aa MW: 21261.5 Da PI: 8.5981 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 47.9 | 2.6e-15 | 17 | 59 | 4 | 46 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 +++le l+++F +p+kd+ keLgv+ +++Kr+C +y I+RWP SMil_00023990-RA_Salv 17 NLNLEILKQHFGKPLKDVEKELGVGRSTIKRACKEYHIDRWPN 59 899***************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 12.218 | 1 | 85 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 9.2E-14 | 17 | 60 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 5.56E-16 | 92 | 174 | No hit | No description |
Gene3D | G3DSA:3.10.20.240 | 5.0E-17 | 99 | 170 | No hit | No description |
SMART | SM00666 | 3.2E-12 | 99 | 179 | IPR000270 | PB1 domain |
PROSITE profile | PS51745 | 16.078 | 99 | 177 | IPR000270 | PB1 domain |
Pfam | PF00564 | 3.0E-13 | 100 | 170 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
LITKTREERK RKSGRMNLNL EILKQHFGKP LKDVEKELGV GRSTIKRACK EYHIDRWPNK 60 EEHIKNLSLI QKQSGRDSQQ DTSNEYTHPV IVVEEEKEKV MIKVKYKEDT IKFELCLSLG 120 VSKLFEEVAT RLKLKVDTFK LKYVDEDNDE ILLACDADLH LCPKTLTATG QTYVELESKK 180 RE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852556.1 | 5e-45 | PREDICTED: protein NLP7-like isoform X1 | ||||
Refseq | XP_012852557.1 | 5e-45 | PREDICTED: protein NLP7-like isoform X2 | ||||
TrEMBL | A0A4D8Z0G4 | 7e-50 | A0A4D8Z0G4_SALSN; Uncharacterized protein | ||||
STRING | Migut.E00886.1.p | 1e-49 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4897 | 4 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 2e-12 | Nin-like family protein |