PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00022899-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

Dof

Protein Properties

Length: 198aa MW: 22319.1 Da PI: 9.0453

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00022899-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.8	2.1e-37	16	73	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + l+cprC+s+ntkfCyynnyslsqPr+fC+aC+ryWt+GG+lrnvP+Ggg rk kk SMil_00022899-RA_Salv 16 DPLPCPRCNSSNTKFCYYNNYSLSQPRHFCRACKRYWTRGGTLRNVPIGGGYRKTKKF 73 5789***************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	4.2E-33	17	72	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.947	18	72	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-24	18	72	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	20	56	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence Send to blast
MASLSANSVM QRSEADPLPC PRCNSSNTKF CYYNNYSLSQ PRHFCRACKR YWTRGGTLRN 60 VPIGGGYRKT KKFKRPPPPP APNPFHTMHM PPLHLNFPFL ETRVSSDTPR FDHTHAPKSG 120 FSPYFRNGFE QNIEDRADFI GFGSSNFAQQ MPCEEMQVVV GSGQIGNQIE QISSSSLLWN 180 SNDVAVWFDP SSSVSSMI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020554179.1	1e-41	LOW QUALITY PROTEIN: dof zinc finger protein DOF1.4-like
TrEMBL	A0A2G9G7Z7	7e-36	A0A2G9G7Z7_9LAMI; Uncharacterized protein
STRING	VIT_10s0003g00040.t01	1e-34	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	5e-34	Dof family protein