PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00022262-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family MYB_related
Protein Properties Length: 613aa    MW: 67485.3 Da    PI: 8.4735
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00022262-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.6e-09485532448
                            S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                            WT  E  +l+++v q+G g+W++I + +     +Rt  ++k++w+++l
  SMil_00022262-RA_Salv 485 WTISEVRKLIEGVSQYGVGRWSRIKKLFFsasAHRTSVDLKDKWRNLL 532
                            9*********************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.155477536IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-13478535IPR009057Homeodomain-like
SuperFamilySSF466893.66E-16479534IPR009057Homeodomain-like
SMARTSM007176.2E-10481534IPR001005SANT/Myb domain
PfamPF002495.9E-7485532IPR001005SANT/Myb domain
CDDcd116607.97E-20485533No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    Send to blast
MENGHPSLGL EDGPIDVEDL LVEPQGGHLS MDSVICFDEK IPNNAMGIGH VSRSSGGSDT  60
GIAQEGKDIL NGEVLNAMPI EAEDGYFQLE NDFCNMGDEY LLGVEFAESI TNLDYGSSEG  120
LQASASDCQI QVSTDGSDTG CRSDLYRTGD LRKCQNSHSV GSSKFGDTPS RRECGTLDGE  180
NPTVSPRSCT LRKSGKSQNS SSSSFLDVLS DENDGRFSRA GEMFFSPKTK RNYDFELTGQ  240
NGATNANEGQ ETLVTASVQA SSSNVLTQKR SRKPTQRYID ALVDPISTHS KRRREVSSSS  300
SIKDKSRGNK DHRKCHVGPK AIKVPPEDPE ESSVIAIQVP FGSLANKECS ESQACDMVQR  360
MECRNSMTKL KGKYVTLNNT LDKSVMTVDL KIRGDCGTGP KKTDSCVTEA ASKKKDGHAA  420
AKNPKKRNDF TISVIRKKRD DCFTTETPNK RDNSRAVVHQ MKRDDALIAE STEEASGRRK  480
HHRLWTISEV RKLIEGVSQY GVGRWSRIKK LFFSASAHRT SVDLKDKWRN LLKASGMQEQ  540
GSQQGEKKRN LAWRPLPKSI LRRVCELATM HPYPKGERGG NVGAARIGHD SPDRSTDITL  600
SDYRRILRSI NGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1424438KKRNDFTISVIRKKR
2476483GRRKHHRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077333.10.0uncharacterized protein LOC105161373 isoform X1
TrEMBLA0A4D8ZZS30.0A0A4D8ZZS3_SALSN; Uncharacterized protein
STRINGMigut.L01689.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.18e-25TRF-like 6