PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | SMil_00022124-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 165aa MW: 18703.3 Da PI: 7.6276 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 26.5 | 1.4e-08 | 126 | 149 | 1 | 24 |
G2-like 1 kprlrWtpeLHerFveaveqLGGs 24 k+r++W+p LH+ F++a+ +LGG+ SMil_00022124-RA_Salv 126 KQRRCWSPHLHNLFIDALLRLGGP 149 79*********************8 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.2E-5 | 123 | 148 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 165 aa Download sequence Send to blast |
MLEHTIQCGT TIETLRKERE RLRERDEGAV VVTEELIPVE ESGDGGGVEP SDHNLSDKKT 60 WMSRVRLWNA PVQFHNGNQT FFLQSRGGAV VALKRGLGKE GKRVEEVSVA VPVEAIDLSD 120 LPNQKKQRRC WSPHLHNLFI DALLRLGGPY GTYLKAQSYY QLLFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49560.1 | 1e-07 | G2-like family protein |