PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00021671-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26164.2 Da PI: 8.2018 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.4 | 1.2e-10 | 84 | 119 | 8 | 47 |
AP2 8 wdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaai 47 +k +g++ AeIrd +rkr++lg+f taeeA +a+ SMil_00021671-RA_Salv 84 KRK-SGKYSAEIRD----RrVRKRIWLGTFRTAEEASAAYL 119 455.8*********....3356*****************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 5.0E-5 | 78 | 142 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-13 | 78 | 125 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.28E-13 | 78 | 118 | No hit | No description |
PROSITE profile | PS51032 | 12.194 | 78 | 118 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-10 | 79 | 123 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 7.8E-5 | 83 | 120 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MEEFSASPRK IRLSYSDPDA TDSSSDESEP PEKKSKRITH EFVLPQGRNL RLECDTKASG 60 KERGGGGDEF RNLITKRNFV GTHKRKSGKY SAEIRDRRVR KRIWLGTFRT AEEASAAYLS 120 RKREIEEDLR ARKGIVWVSS KETREREIEE GLKAREGIVW VASKKTGGSD SPSSVLEITA 180 ADSSDESGGG GAAVPPERKI GFLCGVQIVD PNGFLVGDFS KLDDLSISTA DDGVVLLG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A4D9C9D2 | 7e-92 | A0A4D9C9D2_SALSN; EREBP-like factor |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 6e-11 | erf domain protein 9 |