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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00017462-RA_Salv |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
BBR-BPC |
Protein Properties |
Length: 298aa MW: 33544.1 Da PI: 9.5759 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00017462-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 325.5 | 1.6e-99 | 13 | 298 | 12 | 301 |
GAGA_bind 12 gyyepa..aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpv 97
++y+ + ++++ ++ +l+ + +erd++irer+ al+ekk+a+ erd a +q d+a+ er++a erdn+++al+++e + +++
SMil_00017462-RA_Salv 13 PQYQIKepNAFQ--MNAKLVMLCNERDDAIRERDRALTEKKSALDERDAAMKQLDAAIMERDDAQRERDNAIAALQFHEST---VNAL 95
466633246676..99*************************************************************9997...4555 PP
GAGA_bind 98 gvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
+++ +g+k +++ + ++p+ +sa+ +ree + +alp+++ ++ea +kk + +++k+p+ + a+++kk + k ++ +++ + +
SMil_00017462-RA_Salv 96 LSGSARGSKRTHHPTN-HHPNSMQSAQSMREECIHDALPVSHVPHEAPLSKKGTRAKTNKDPQMRSARSPKKVK-KIGEDLNRQVTTD 181
6899999*99998887.899999999999*************99999999999999999999999999888854.5556777777678 PP
GAGA_bind 186 rskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
skae++ +dl ++n++ +Des++PvPvCsCtG++rqCYkWGnGGWqS+CCtt++S yPLP+++++r+aR++grKmS+++f++lL +L
SMil_00017462-RA_Salv 182 GSKAEWDAQDLgSMNQIMFDESSMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTSLSLYPLPQMPNKRHARMGGRKMSGSVFSRLLTRL 269
8**********88*************************************************************************** PP
GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
aa G dls pvDLk++WAkHGtn+++ti+
SMil_00017462-RA_Salv 270 AAAGQDLSIPVDLKEYWAKHGTNRYITIK 298
****************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MDYHKVPQWN AMPQYQIKEP NAFQMNAKLV MLCNERDDAI RERDRALTEK KSALDERDAA 60 MKQLDAAIME RDDAQRERDN AIAALQFHES TVNALLSGSA RGSKRTHHPT NHHPNSMQSA 120 QSMREECIHD ALPVSHVPHE APLSKKGTRA KTNKDPQMRS ARSPKKVKKI GEDLNRQVTT 180 DGSKAEWDAQ DLGSMNQIMF DESSMPVPVC SCTGVPRQCY KWGNGGWQSS CCTTSLSLYP 240 LPQMPNKRHA RMGGRKMSGS VFSRLLTRLA AAGQDLSIPV DLKEYWAKHG TNRYITIK
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |