PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00017312-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 273aa    MW: 29464.9 Da    PI: 5.052
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00017312-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.7e-14217265351
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                            + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke  +
  SMil_00017312-RA_Salv 217 AQQRQRRMIKNRESAARSRERKQAYQVELESMAVRLEEENEQLLKEKRH 265
                            679****************************************999665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-10215272IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841217266IPR004827Basic-leucine zipper domain
PfamPF001702.8E-12217263IPR004827Basic-leucine zipper domain
CDDcd147071.74E-15219267No hitNo description
SuperFamilySSF579592.06E-10219266No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-12220266No hitNo description
PROSITE patternPS000360222237IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MASSKIMASS TSRDSDLKRK LSACTSTSST ADFLRIDSGS NARGDLASGS AVLGGFLSNA  60
CVARNSAPDQ VHRAAVEAES SSSTLLNAEI TLLDAAGAVT PISDGEREPP RMARKTVDDV  120
WREIVAGKKS EKQPKEEMMT LEDFLAKAGA EEEDEEVEAT RTSVEVKEEG LSGRFYSLES  180
GSGAIGAALS GGLDVGGLSG GRGRRSLSLL EPMDKAAQQR QRRMIKNRES AARSRERKQA  240
YQVELESMAV RLEEENEQLL KEKRHLLPVF EIN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101351.11e-117G-box-binding factor 4
TrEMBLA0A2G9I0641e-121A0A2G9I064_9LAMI; Uncharacterized protein
STRINGMigut.C00999.1.p2e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-21G-box binding factor 4