PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00014691-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family ERF
Protein Properties Length: 143aa    MW: 16237.3 Da    PI: 9.819
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00014691-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77.1e-19755254
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                           +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aaka+++a++ + 
  SMil_00014691-RA_Salv  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAAKAYDEAARIMC 55
                           69******9.**********8.....334**********************9775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.90E-34663No hitNo description
SuperFamilySSF541712.88E-20765IPR016177DNA-binding domain
PROSITE profilePS5103220.35764IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-33765IPR001471AP2/ERF domain
SMARTSM003802.5E-38770IPR001471AP2/ERF domain
PfamPF008472.4E-11755IPR001471AP2/ERF domain
PRINTSPR003673.5E-11819IPR001471AP2/ERF domain
PRINTSPR003673.5E-113046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MGRPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAAKAYDEA ARIMCGSRAR  60
TNFSSSSSSS TNLLSPTLMA KLHKCHITSL SKPNKPAVQP HKMEFLQELK SDDHHHIEQM  120
INELLYYGSL ELSSAVGNSS SQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-17863662ATERF1
3gcc_A1e-17863662ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082170.11e-60ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW55e-53ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A4D8YSX21e-66A0A4D8YSX2_SALSN; Uncharacterized protein
STRINGXP_004498778.15e-59(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13622476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.13e-38ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]