PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00014643-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | BES1 | ||||||||
Protein Properties | Length: 516aa MW: 54452 Da PI: 8.0946 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 171.9 | 3.4e-53 | 3 | 129 | 2 | 133 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.. 87 g+ r+p+wkErEnnk RERrRRa+aaki+aGLR +Gny lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++ ++ s s SMil_00014643-RA_Salv 3 GGSRMPSWKERENNKCRERRRRAMAAKIFAGLRLYGNYTLPKHCDNNEVLKALCHEAGWTVEPDGTTYRKGCKPVDSMDFMKGSISaa 90 689************************************************************************8877777665522 PP DUF822 88 .aspesslqsslkssalaspvesysaspksssfpspssldsislasa 133 s +s++q +sp++sys+ p+ +++ p + s++s+ SMil_00014643-RA_Salv 91 sGSACSPYQ--------QSPCTSYSPIPADGNSLIPWLRNLSSSTSS 129 256777777........566666665555544444433333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.0E-52 | 3 | 132 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 516 aa Download sequence Send to blast |
MVGGSRMPSW KERENNKCRE RRRRAMAAKI FAGLRLYGNY TLPKHCDNNE VLKALCHEAG 60 WTVEPDGTTY RKGCKPVDSM DFMKGSISAA SGSACSPYQQ SPCTSYSPIP ADGNSLIPWL 120 RNLSSSTSSA SSSKFVHHYM HGGGSISAPV TPPSSSPTPG TPRVTADWGG SFARLGSQHP 180 LLPLSTPPSP GRQMWYPGTH VSQSGTTSPT FSLVSSNPFG FRVEDLTRNG SLMCTPGRSG 240 TCSPAVAGAA DIPMAQVIPN EFVFGSSSTT SLVKPWEGET IHEECGPDEL ELTLGSSKAS 300 WIEGDDSWIS TSIVFVGCKP VDSMDFMKGS ISAASGSACS PYQQSPCTSY SPIPADGNSL 360 IPWLRNLSSS TSSPSSSKFV HHYMHGGGSI SAPVTPPSSS PTPGTPRVTA DWGGSFARLG 420 SQHPLLPLST PPSPGRQMWY PGTHVSQSGT TSPTFSLVSS NPFGFRVEDL TRNGSLMCTP 480 GRSGTCSPAV AGAADIPMAQ VIPNEFVLEA AARRVS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082786.1 | 1e-125 | BES1/BZR1 homolog protein 4 isoform X1 | ||||
Swissprot | Q9ZV88 | 2e-84 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A4D8YVT9 | 1e-123 | A0A4D8YVT9_SALSN; Uncharacterized protein | ||||
STRING | Migut.M00715.1.p | 1e-108 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1984 | 24 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 8e-64 | BES1/BZR1 homolog 4 |