PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00014109-RA_Salv
Common NameWRKY26
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family WRKY
Protein Properties Length: 439aa    MW: 48674.4 Da    PI: 6.6466
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00014109-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-30193252159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed++++++tYeg+Hnh+
  SMil_00014109-RA_Salv 193 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDKSILITTYEGTHNHP 252
                            58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-32178254IPR003657WRKY domain
SuperFamilySSF1182908.24E-28186254IPR003657WRKY domain
PROSITE profilePS5081129.08188254IPR003657WRKY domain
SMARTSM007747.7E-37193253IPR003657WRKY domain
PfamPF031062.4E-27194252IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MATQQDEEEA EEISATMEPH LSLKLDAQLH SAPSSDTQDP PPILNSHQGF NTQELTVLQM  60
KMNRVKEENK QLRNEVEKTM KDYTDLQTKF VMIQQNSKNK DPNTIESVIE KDDVAPRRRS  120
ASEEGAENDG LGLSLRVASS CSNTPEEKRE EIMGAFRPTL HTNNMTGIMN HINSPPNKRA  180
RVSVRARCDS ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDKSI  240
LITTYEGTHN HPLPVGATAM ASTTSATSPS PYMMFDVNNP FHMQNNQVQH SPFYNPLINP  300
SSSFIPNLRP LNPNYYDPTK GIVLDLTNNH PGSSNSMPQL GYSLIPKPPN FNGNTQLFPH  360
PNALLQDQDG GNFDKTTSLS ENVSAITSDP KFRVAVAAAI SSLINKESQT VPKDGESGGN  420
RDKSWILESS NPIHQSPTE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21180256176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231490.0KM823149.1 Salvia miltiorrhiza WRKY protein (WRKY26) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092693.21e-132probable WRKY transcription factor 9
SwissprotQ9C9F05e-70WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A0D5Y9A10.0A0A0D5Y9A1_SALMI; WRKY protein
STRINGVIT_12s0055g00340.t011e-114(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72872129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-64WRKY DNA-binding protein 9