PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00013713-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21485.2 Da PI: 9.3443 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ + g SMil_00013713-RA_Salv 5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMSG 55 59*******9.**********8.....334*********************987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.37E-33 | 5 | 64 | No hit | No description |
Pfam | PF00847 | 2.4E-12 | 6 | 53 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.6E-40 | 6 | 69 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.0E-33 | 6 | 63 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.957 | 6 | 63 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-20 | 6 | 64 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.1E-10 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-10 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010143 | Biological Process | cutin biosynthetic process | ||||
GO:0010166 | Biological Process | wax metabolic process | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MVQTKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMSGRNAKT 60 NFPVPANQDA NANDISPSSS SNSPNSSRAA SLSSILSAKL RKCCKSPSPS LTCLRLDTEN 120 SHIGVWQKRA GSRSDSSWVM TVELGKKKTA ADVQDPAAAD AAAALPATAL PAAEVRDGID 180 EEERIALQMI EELLNRN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 9e-17 | 3 | 67 | 2 | 67 | ATERF1 |
3gcc_A | 9e-17 | 3 | 67 | 2 | 67 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073438.1 | 5e-96 | ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 1e-85 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A2G9HFS6 | 9e-99 | A0A2G9HFS6_9LAMI; Uncharacterized protein | ||||
STRING | Migut.I00778.1.p | 1e-89 | (Erythranthe guttata) | ||||
STRING | XP_010250110.1 | 1e-89 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1352 | 24 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 4e-68 | ERF family protein |