PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00012800-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

NZZ/SPL

Protein Properties

Length: 324aa MW: 36005.5 Da PI: 6.5161

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00012800-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	23	1.3e-07	13	72	46	107
NOZZLE 46 kpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvd 107 + g ++ + kqkk rg+gva+le+ ++ee++kk ++ + + + a++ +at p pv+ SMil_00012800-RA_Salv 13 HSGDRSRNVKQKKIPQRGLGVAQLEKIRVEEQRKKETANALPNNA--IASATDATLSPSPVN 72 568888899**************************9888888777..556677888888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	9.2E-5	14	59	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MAQEEQHIVS STHSGDRSRN VKQKKIPQRG LGVAQLEKIR VEEQRKKETA NALPNNAIAS 60 ATDATLSPSP VNFRSPSLPV QMNGSVEDAA SWCRLWNGDY NHRNDSTAEF RPPVNLQSES 120 NAALPQRFFR FQRPASPVVN TSSPSASSHM EPPSNQNMHN IHCNSYASSS SSWPEEYKMV 180 GVKRSYPFSL ESPPAGSFNG HFDPSSVASK SRRDELPSCG SGYAAVAART EPRNVYMRDG 240 PSNLPEDDGR LNGNFLTLAP PPWNSKHTYA TDNPESQGPE ENETRQVHHW IASRSREEPF 300 SFFPVRADES DEEKGETIDL NLKL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011082734.1	1e-83	WAS/WASL-interacting protein family member 1 isoform X1
Refseq	XP_020550010.1	1e-83	WAS/WASL-interacting protein family member 1 isoform X1
TrEMBL	A0A4D9B0X1	1e-100	A0A4D9B0X1_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2123	2	3