PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00011337-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 102aa MW: 11803.5 Da PI: 11.5893 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.8 | 1e-07 | 11 | 44 | 17 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 Arr R+RK++ +eeL v+eL +N++ l SMil_00011337-RA_Salv 11 ARRRRLRKQKHMEELMPQVAELRRQNHQILTSLR 44 9*************************98765554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 4.34E-5 | 11 | 52 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.8E-4 | 11 | 47 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MFFISLRSSP ARRRRLRKQK HMEELMPQVA ELRRQNHQIL TSLRATRQHH VAVESGNAAS 60 DLGFPQQNPL APPLEPPEPH QPPHHPPPSD PILYCPRQIF RS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 11 | 17 | RRRRLRK |
2 | 11 | 18 | RRRRLRKQ |
3 | 12 | 17 | RRRLRK |
4 | 13 | 19 | RRLRKQK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A4D8YFE7 | 4e-19 | A0A4D8YFE7_SALSN; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.2 | 7e-08 | basic leucine-zipper 44 |