PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00009117-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 23125.7 Da PI: 4.6922 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.2 | 5.6e-20 | 96 | 146 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd k +r++lg+f taeeAa a+++a+++++g SMil_00009117-RA_Salv 96 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFETAEEAALAYDKAALRIRG 146 8********.**********3...2234*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.10.180.10 | 9.8E-4 | 71 | 106 | IPR029068 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
CDD | cd00018 | 1.14E-28 | 95 | 154 | No hit | No description |
Pfam | PF00847 | 8.0E-15 | 96 | 146 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.0E-38 | 96 | 160 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.696 | 96 | 154 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-23 | 96 | 156 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.2E-11 | 97 | 108 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.7E-32 | 107 | 155 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-11 | 120 | 136 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MGVESESSEA ILENVWAKFM AKTGEDDDVS KSWEGLPSLE RDGSMEILER LPSLGRWISM 60 GAEAWEQFLE GSNSTALTAN DCAAKAETAA AAGRKHYRGV RRRPWGKYAA EIRDSSRKGA 120 RVWLGTFETA EEAALAYDKA ALRIRGPKTH LNFPLETAND GADRWKRAAD DGEEPLQKRS 180 RRVDVDHDVL EFEDLGTEYL ESLLYSL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-28 | 95 | 157 | 4 | 66 | ATERF1 |
3gcc_A | 1e-28 | 95 | 157 | 4 | 66 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00441 | DAP | Transfer from AT4G18450 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096448.1 | 1e-79 | ethylene-responsive transcription factor ERF091 | ||||
Swissprot | O49515 | 7e-36 | ERF91_ARATH; Ethylene-responsive transcription factor ERF091 | ||||
TrEMBL | A0A4D8YHD9 | 3e-96 | A0A4D8YHD9_SALSN; EREBP-like factor | ||||
STRING | XP_008349214.1 | 1e-69 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11237 | 18 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 6e-27 | ERF family protein |