PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00008579-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family MYB_related
Protein Properties Length: 255aa    MW: 28298.9 Da    PI: 9.8947
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00008579-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.21.1e-1486130347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  SMil_00008579-RA_Salv  86 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 130
                            8*****************************99************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512937.437126IPR017884SANT domain
Gene3DG3DSA:1.10.10.606.9E-1377135IPR009057Homeodomain-like
PROSITE profilePS5129420.72879135IPR017930Myb domain
SuperFamilySSF466895.16E-1780134IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-1782134IPR006447Myb domain, plants
SMARTSM007173.2E-1383133IPR001005SANT/Myb domain
PfamPF002494.1E-1386130IPR001005SANT/Myb domain
CDDcd001677.13E-1286131No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
LAKVAAMVPG KTVGDVIRQY KELEDDVSSI EAGLIPVPGY TTSSPFTLEW GSAAHGYDGF  60
KHSFAAGRKA PPPGRPSEQE RKKGVPWTEE EHKLFLMGLK KYGKGDWRNI SRNFVITRTP  120
TQVASHAQKY FIRQLSGGKD KRRASIHDIT TVNLNDHQAP SPERKKQPSP EQPSILAPQS  180
EKLPNYQWSQ ASNEAVMGFS SLCHGNMFSS PPYGIASFGH KMHGHHLQRG VVHDAFMGSQ  240
NAVFQMQPEL HYPNA
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00568DAPTransfer from AT5G58900Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080854.11e-139transcription factor DIVARICATA isoform X1
RefseqXP_020550520.11e-139transcription factor DIVARICATA isoform X2
SwissprotQ8S9H71e-132DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A4D8YRZ71e-168A0A4D8YRZ7_SALSN; Uncharacterized protein
STRINGEOY338011e-120(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.15e-88Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]