PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00008145-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | Nin-like | ||||||||
Protein Properties | Length: 553aa MW: 62865.2 Da PI: 8.4511 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91 | 9.3e-29 | 423 | 473 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++s+++l+kyFs+++kdAAk++gvc+T+LKriCRq+GI+RWP Rki+++ SMil_00008145-RA_Salv 423 EKHVSFSVLQKYFSGSLKDAAKSIGVCPTTLKRICRQHGIQRWPCRKINKV 473 799**********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.062 | 410 | 493 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 4.9E-25 | 426 | 473 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 553 aa Download sequence Send to blast |
MLRVMYLLKE SSIEGTLAQI WVPVKSGNEY ILSTREQPYL SDHQLYGYRE VSQLFTFSIE 60 SKPDSFLGLP GRVFTSRTPE WTSNVMYYNK TEYMRIKHAV DHEVQGSIAL PIFEDDSLER 120 PCCAVLELVT KKEEYNFDLE MEYVCQALEV MNLRTKVPLK LYPQALSKNQ RAVLAEIKDV 180 LHVVCQTHGL PLALTWIPRK YVERADEETM RARSRGYNAG LNKKCVLCTE DAACYINDKG 240 MESFVRVCAE HYLEEGQGIV GKALQSNQPF FYPDVKEYHV KDYPLVHHAR KFGLNAAIAI 300 RIRSIYTGET DYILEIFLPI NMKGSVEHQL LLSNLSITMQ RICKSLRTVS DDELLNTEDS 360 KTKLLDNNIV ESPWARTSSR TSFGRSLING ESNRVTGAHC SHDQPIVVGS KKLMEKKKRS 420 TTEKHVSFSV LQKYFSGSLK DAAKSIGVCP TTLKRICRQH GIQRWPCRKI NKVSRSLRKI 480 QSVLGSVEGG LKFDTTIKDL VAPTQNPSFE NSCLSIQNVL PSSCLTTVKL EQETDNQFQI 540 YDSRLAAIEA KLS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073897.1 | 0.0 | protein NLP9 | ||||
Swissprot | Q9M1B0 | 0.0 | NLP9_ARATH; Protein NLP9 | ||||
TrEMBL | A0A4D8ZZ22 | 0.0 | A0A4D8ZZ22_SALSN; Uncharacterized protein | ||||
STRING | Migut.N03106.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3981 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.2 | 0.0 | Nin-like family protein |